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    Genome-wide identification of the TIFY gene family in three cultivated Gossypium species and the expression of JAZ genes

    Genome-wide identification of the TIFY gene family in three cultivated Gossypium species and the expression of JAZ genes

    作者: Q, GH, X, XR, P, L, YL, YF.

    刊名:Scientific Reports

    年卷页码:DOI: 10.1038/rep42418

    网联:

     

    Abstract

    TIFY proteins are plant-specific proteins containing TIFY, JAZ, PPD and ZML subfamilies. A total of 50, 54 and 28 members of the TIFY gene family in three cultivated cotton species—Gossypium hirsutum, Gossypium barbadense and Gossypium arboretum—were identified, respectively. The results of phylogenetic analysis showed that these TIFY genes were divided into eight clusters. The different clusters of gene family members often have similar gene structures, including the number of exons. The results of quantitative reverse transcription polymerase chain reaction (qRT-PCR) showed that different JAZ genes displayed distinct expression patterns in the leaves of upland cotton under treatment with Gibberellin (GA), methyl jasmonate (MeJA), Jasmonic acid (JA) and abscisic acid (ABA). Different groups of JAZ genes exhibited different expression patterns in cotton leaves infected withVerticillium dahliae. The results of the comparative analysis of TIFY genes in the three cultivated species will be useful for understanding the involvement of these genes in development and stress resistance in cotton.

     

    文章来源: 时间:2017-09-28 浏览625次